Note: This addon document is for an older version of GRASS GIS that will be discontinued soon. You should upgrade your GRASS GIS installation, and read the current addon manual page.
NAME
r.pi.graph - Graph Theory for connectivity analysis.
KEYWORDS
raster
SYNOPSIS
r.pi.graph
r.pi.graph --help
r.pi.graph [-a] input=name output=string keyval=integer distance=float neighborhood=string index=string [--overwrite] [--help] [--verbose] [--quiet] [--ui]
Flags:
- -a
- Set for 8 cell-neighbors. 4 cell-neighbors are default
- --overwrite
- Allow output files to overwrite existing files
- --help
- Print usage summary
- --verbose
- Verbose module output
- --quiet
- Quiet module output
- --ui
- Force launching GUI dialog
Parameters:
- input=name [required]
- Name of input raster map
- output=string [required]
- Name of the new raster file
- keyval=integer [required]
- Key value
- distance=float [required]
- Bounding distance [0 for maximum distance]
- neighborhood=string [required]
- Neighborhood definition
- Options: nearest_neighbor, relative_neighbor, gabriel, spanning_tree
- index=string [required]
- Cluster index
- Options: connectance_index, gyration_radius, cohesion_index, percent_patches, percent_area, number_patches, number_links, mean_patch_size, largest_patch_size, largest_patch_diameter, graph_diameter
Graph Theory for connectivity analysis.
...
An example for the North Carolina sample dataset using class 5 (forest):
Computing a graph of all patches (4 neighbourhood rule) using a maximum
distance of 10 pixel, the Gabriel method and as resulting index the
largest patch diameter:
r.pi.graph input=landclass96 output=landclass96_graph keyval=5 distance=10 neighborhood=gabriel index=largest_patch_diameter
the results are 2 files:
landclass96_graph: the information of the index are provided (here a
range of 3-589 of patch diameter)
landclass96_graph_clusters: the generated cluster IDs are provided
(here 16 clusters are identified), doing it with a distance of 5 pixel
is resulting in a total of 66 clusters.
r.pi.corearea,
r.pi.corr.mw,
r.pi.csr.mw,
r.pi.export,
r.pi.graph.dec,
r.pi.graph.pr,
r.pi.graph.red,
r.pi.grow,
r.pi.import,
r.pi.index,
r.pi.lm,
r.pi.odc,
r.pi.prob.mw,
r.pi.rectangle,
r.pi
Programming: Elshad Shirinov
Scientific concept: Dr. Martin Wegmann
Department of Remote Sensing
Remote Sensing and Biodiversity Unit
University of Wuerzburg, Germany
Port to GRASS GIS 7: Markus Metz
SOURCE CODE
Available at:
r.pi.graph source code
(history)
Latest change: Mon Jun 28 07:54:09 2021 in commit: 1cfc0af029a35a5d6c7dae5ca7204d0eb85dbc55
Note: This addon document is for an older version of GRASS GIS that will be discontinued soon. You should upgrade your GRASS GIS installation, and read the current addon manual page.
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GRASS Development Team,
GRASS GIS 7.8.8dev Reference Manual